GBS Publications

Journal Articles
Conference Abstracts and Proceedings
Articles by Topic - Vision, Somatosensation, Natural Stimuli, Adaptation & Plasticity, Estimation, Other

Journal Articles

G. Desbordes, C. Weng, J. Jin, D. A. Butts, G. B. Stanley, and J. M. Alonso. Adaptation effects on temporal precision across neuronal populations in the visual pathway, manuscript in preparation, 2007.

M. Ding, E. H. Lo, and G. B. Stanley. Sustained focal cortical compression reduces electrically-induced seizure threshold, manuscript in preparation, 2007.

A. S. Boloori, R. A. Jenks, and G. B. Stanley. Feature selectivity in the vibrissa system, manuscript in preparation, 2007.

R. A. Jenks, A. Vaziri, A. S. Boloori, and G. B. Stanley. Texture and self-motion signals in the somatosensory pathway, submitted, 2007.

D. A. Butts, C. Weng, J. Z. Jin, C. I. Yeh, N. A. Lesica, J. M. Alonso, and G. B. Stanley. Temporal precision in the neural code and the time scales of natural vision, Nature, 449:92-95, 2007. PDF, Supplement

C. W. Clifford, M. A. Webster, G. B. Stanley, A. A. Stocker, A. Kohn, T. O. Sharpee, and O. Schwartz. Visual adaptation: neural, psychological and computational aspects, Vision Research, 47:3125-3131, 2007. PDF

A. Vaziri, R. A. Jenks, A. S. Boloori, and G. B. Stanley. Flexible probes for surface topology: from biology to technology, Experimental Mechanics, 47: 417-425, 2007. PDF

R. M. Webber and G. B. Stanley. Dynamic modulation of cortical sensitivity to thalamic temporal precision, submitted, 2007.

N. A. Lesica, J. Z. Jin, C. Weng, C. I. Yeh, D. A. Butts, G. B. Stanley, and J. M. Alonso. Adaptation to stimulus contrast and correlations
during natural visual stimulation, Neuron, 55:479-491, 2007. PDF

L. M. Frank, E. N. Brown, and G. B. Stanley. Hippocampal and cortical place cell plasticity: implications for episodic memory, Hippocampus, 16:775-784, 2006. PDF

A. S. Boloori and G. B. Stanley. The dynamics of spatiotemporal response integration in vibrissa representation in the primary somatosensory cortex, J. Neurosci., 26:3767-3782, 2006. PDF

R. M. Webber and G. B. Stanley. Transient and steady-state dynamics of cortical adaptation, J. Neurophys., 95:2923-2932, 2006. PDF

N. A. Lesica, C. Weng, J. Jin, C. Yeh, J. M. Alonso, and G. B. Stanley. Dynamic encoding of natural luminance patterns by LGN bursts, PLOS Biology, 4(7), e209, 2006. PDF

N. A. Lesica and G. B. Stanley. Decoupling functional mechanisms of adaptive encoding in the visual pathway, Network: Computation in Neural Systems, 17:43-60, 2006. PDF

N. A. Lesica and G. B. Stanley. An LGN inspired detect/transmit framework for high fidelity relay of visual informatoin with limited bandwidth, 1st International Symposium on Brain, Vision, and Artificial Intelligence, Naples, 2005. PDF

N. A. Lesica and G. B. Stanley. Functional identification of adaptive visual encoding, to appear in Neural Engineering/Signal Processing, edited by Metin Akay, IEEE/Wiley, 2005.

G. B. Stanley. Neural System Identification, in Neural Engineering, edited by Bin He, Springer, 2005. PDF

N. A. Lesica and G. B. Stanley. Improved tracking of time-varying encoding properties of visual neurons by extended recursive least-squares, IEEE Trans. Neural Sys. Rehab., 2005. PDF

N. A. Lesica and G. B. Stanley. Encoding of natural scene movies by tonic and burst spikes in the lateral geniculate nucleus, J. Neurosci., 24:10731-10740, 2004. PDF

L. M. Frank, G. B. Stanley, and E. N. Brown. Hippocampal plasticity across multiple days of exposure to novel environments, J. Neurosci., 24: 7681-7689, 2004. PDF

R. M. Webber and G. B. Stanley. Nonlinear encoding of tactile patterns in the barrel cortex, 91: 2010-2022, J. Neurophys., 2004. PDF

E. A. Goldstein, J. T. Heaton, J. B. Kobler, G. B. Stanley, and R. E. Hillman. Design and implementation of a hands-free electrolarynx device controlled by neck strap muscle electromyographic activity, IEEE Trans. Biomed. Eng., 51:325-332, 2004. PDF

N. A. Lesica, A. S. Boloori, and G. B. Stanley. Adaptive encoding in the visual pathway, Network: Comput. in Neural Systems, 14:119-135, 2003. PDF

G. B. Stanley and R. W. Webber. A point process analysis of sensory encoding, J. Comput. Neurosci., 15:321-333, 2003. PDF

G. B. Stanley. Adaptive spatiotemporal receptive field estimation in the visual pathway, Neural Computation, 14:2925-2946, 2002. PDF

B. Lau, G. B. Stanley, and Y. Dan. Computational subunits of visual cortical neurons revealed by artificial neural networks, PNAS, 99(13):8974-8979, 2002. PDF

G. B. Stanley, K. Poolla, and R. A. Siegel. Threshold modeling of autonomic control of heart rate variability, IEEE Trans. Biomed. Eng., 49(9):1147-1153, 2000. PDF

G. B. Stanley, F. F. Li, and Y. Dan. Reconstruction of natural scenes from ensemble responses in the LGN, J. Neurosci., 19(18):8036-8042, 1999. PDF

G. Stanley, D. Verotta, N. Craft, R. A. Siegel, and J. B. Schwartz. Age effects on interrelationships between lung volume and heart rate during standing, Amer. J. Physiol., 42:H2128-H2134, 1997. PDF

G. Stanley, D. Verotta, N. Craft, R. A. Siegel, and J. B. Schwartz. Age and autonomic effects on interrelationships between lung volume and heart rate, Amer. J. Physiol., 39:H1833-H1840, 1996.

Conference Abstracts & Proceedings

R. A. Jenks, A. Vaziri, A. S. Boloori, and G. B. Stanley. Representation of tactile features by the vibrissa system in awake behaving rats, SFN, Atlanta, 2006. PDF

A. S. Boloori, D. A. Butts, R. A. Jenks, and G. B. Stanley. Coding of tactile features by layer 4 of the rat S1 cortex, SFN, Atlanta, 2006. PDF

R. M. Webber and G. B. Stanley. Adaptation dynamically alters cortical sensitivity to thalamic input precision, SFN, Atlanta, 2006. PDF

D. A. Butts, C. Weng, J. Z. Jin, C. I. Yeh, N. A. Lesica, J. A. Alonso, and G. B. Stanley. The role of temporal precision in the neural code and its relationship to the time scales of natural stimuli, SFN, Atlanta, 2006. PDF

A. S. Boloori and G. B. Stanley. How does joint activity across a population of neurons influence the precision of coding in the cortex?, AREADNE, Santorini, Greece, 2006. PDF

D. A. Butts, C. Weng, J. Z. Jin, C. I. Yeh, N. A. Lesica, J. M. Alonso, G. B. Stanley. Contrast adaptation and the role of temporal precision in the visual code, COSYNE, Salt Lake City Utah, 2006.

R. M. Webber and G. B. Stanley. Nonlinear cortical responses can be generated by precise timing of thalamic spikes in the rat vibrissa system, COSYNE, Salt Lake City Utah, 2006. PDF

D. A. Butts, C. Weng, J. Z. Jin, C. I. Yeh, N. A. Lesica, J. A. Alonso, and G. B. Stanley. Changes in functional properties of LGN neurons with contrast and their significance in information transmission, SFN, Washington DC, 2005. PDF

N. A. Lesica, J. Z. Jin, C. Weng, C. I. Yeh, D. A. Butts, G. B. Stanley, and J. A. Alonso. The effects of contrast adaptation during natural stimulation, SFN, Washington DC, 2005. PDF

M. C. Ding, E. Tejima, E. H. Lo, and G. B. Stanley, Electrophysiology of the rat barrel cortex following traumatic brain injury, SFN, Washington DC, 2005. PDF

R. A. Jenks and G. B. Stanley. Stimulus-driven response dynamics of the whisker/barrel-cortex system in awake behaving rats, SFN, Washington DC, 2005. PDF

A. Boloori and G. B. Stanley. Spatiotemporal interactions influence precision of coding by single- and multiple neurons in the rat barrel cortex, SFN, Washington DC, 2005. PDF

J. R. Chen, L. M. Frank, E. N. Brown, G. B. Stanley. Theta waves in the hippcampus and the deep layer of the entorhinal cortex become more phase-locked with increasing locomotive speed, SFN, Washington DC, 2005. PDF

G. B. Stanley, A. Boloori, R. A. Jenks, R. M. Webber. A nonlinear dynamical model of excitatory-inhibitory interactions in the vibrissa system, SFN, Washington DC, 2005. PDF

R. M. Webber and G. B. Stanley. Thalamocortical transformations of temporal stimulation patterns in the rat vibrissa system, SFN, Washington DC, 2005. PDF

N. A. Lesica and G. B. Stanley. Signal detection of salient visual features by the early visual pathway, Annual Meeting of the BMES, Baltimore, 2005.

R. M. Webber and G. B. Stanley. Thalamocortical transformations of tactile patterns in the rat vibrissa system, Annual Meeting of the BMES, Baltimore, 2005.

J. R. Chen, L. M. Frank, E. N. Brown, and G. B. Stanley. Theta in the entorhinal-hippocampus axis becomes more phase-locked as locomotive speed increases, Annual Meeting of the BMES, Baltimore, 2005.

L. M. Frank, G. B. Stanley, and E. N. Brown. Hippocampal Plasticity across Multiple Days of Exposure to Novel Environments, Annual Meeting of the BMES, Baltimore, 2005.

N. A. Lesica and G. B. Stanley. Signal detection of salient visual features by the early visual pathway, Annual IEEE EMBS Meeting, Shanghai, 2005. PDF

R. M. Webber and G. B. Stanley. Post-excitatory suppression dictates the dynamics of adaptation in barrel cortex, COSYNE, Salt Lake City, 2005. PDF

D. A. Butts and G. B. Stanley. The important aspects of visual encoding: relating receptive fields to mutual information rates in visual neurons, COSYNE, Salt Lake City, 2005. PDF

N. A. Lesica and G. B. Stanley. LGN bursts enhance detection of specific stimulus features, COSYNE, Salt Lake City, 2005. PDF

R. M. Webber and G. B. Stanley. Transient adaptation properties in rat barrel cortex are affected by the initial direction of vibrissa deflection, SFN, San Diego, 2004. HTML

N. A. Lesica and G. B. Stanley. The role of LGN bursts in natural vision, SFN, San Diego, 2004. HTML

A. S. Boloori and G. B. Stanley. Nonlinear center-surround interactions in the barrel cortex, SFN, San Diego, 2004. HTML

G. B. Stanley, R. M. Webber, and A. S. Boloori. Nonlinear spatiotemporal encoding in the rat vibrissa system, Barrel Cortex Meeting, EPFL, Lausanne, Switzerland, 2004. HTML

N. A. Lesica and G. B. Stanley. The role of LGN bursts in natural vision, COSYNE, Cold Spring Harbor Laboratories, 2004. HTML

A. S. Boloori and G. B. Stanley. Nonlinear center-surround interactions in the barrel cortex, COSYNE, Cold Spring Harbor Laboratories, 2004. POSTSCRIPT

D. A. Butts, A. E. Desjardins, and G. B. Stanley. Quick and accurate information calculations based on linear characterizations of sensory neurons, SFN, New Orleans, 2003. HTML

N. A. Lesica and G. B. Stanley. Adaptive interactions in the visual pathway, SFN, New Orleans, 2003. HTML

R. A. Jenks, T. Warren, L. M. Frank, and G. B. Stanley. Texture detection and discrimination by the whisker/barrel-cortex system in awake behaving rats, SFN, New Orleans, 2003. HTML

R. M. Webber and G. B. Stanley. Prediction of responses to periodic and aperiodic stimuli in the rat barrel cortex, SFN, New Orleans, 2003. HTML

D. A. Butts, A. E. Desjardins, and G. B. Stanley. Model based information calculations for neuronal encoding, Computational Neuroscience (CNS), Alicante, Spain, 2003.

G. B. Stanley and R. M. Webber. A point process analysis of sensory processing, 1st Annual IEEE-EMBS Conference on Neural Engineering, Capri Island, 2002.

R. M. Webber and G. B. Stanley. Temporal dynamics in somatosensory cortex, 32nd annual meeting of the Society for Neuroscience, Orlando, 2002.

N. A. Lesica and G. B. Stanley. Estimation of adaptive encoding in the visual pathway, IEEE-EMBS, Houston, 2002.

A. S. Boloori and G. B. Stanley. Stimulus reconstruction from nonlinear neuronal encoding, CNS, Chicago, 2002.

G. B. Stanley. Adaptive estimation of time-varying dynamics in the visual pathway, NIPS Workshop on Information and Statistical Structure in Spike Trains, 2001.

G. B. Stanley and A. SeyedBoloori. Decoding in neural systems: stimulus reconstruction from nonlinear encoding, Engineering in Medicine and Biology Society, Istanbul, 2001.

G. B. Stanley. Wiener kernel estimation for neural systems with natural inputs, Proceedings of the 10th Annual Computational Neuroscience Meeting, Monterey, 2001.

A. SeyedBoloori and G. B. Stanley. Stimulus reconstruction as the inverse of the neural encoding process: a Wiener series approach, 5th International Conference on Cognitive and Neural Systems, Boston, 2001.

N. Lesica and G. B. Stanley. A computational analysis of Wiener kernel estimation in neural systems, 5th International Conference on Cognitive and Neural Systems, Boston, 2001.

G. B. Stanley, Adaptive Estimation of Time-varying Dynamics in the Visual Pathway, NIPS Workshop on Information and Statistical Structure in Spike Trains, 2001.

G. B. Stanley. Time-varying properties of neurons in visual cortex: estimation and prediction, 30th annual meeting of the Society for Neuroscience, New Orleans, 2000.

G. B. Stanley, Algorithms for real-time prediction in neural systems, Engineering in Medicine and Biology Society, Chicago, 2000.

G. B. Stanley. Recursive stimulus reconstruction algorithms for real-time implementation in neural ensembles, Annual Computational Neuroscience Meeting, Brugge, Belgium, 2000.

G. B. Stanley, F.F. Li, and Y. Dan. Predicting Neuronal Responses in the Striate Cortex with Neural Networks, 29th annual meeting of the Society for Neuroscience, Miami, 1999.

G. Stanley, F.F. Li, and Y. Dan. Reconstruction of natural scenes from ensemble responses in the LGN, 28th annual meeting of the Society for Neuroscience, Los Angeles, 1998.

G. Stanley, K. Poolla, and R.A. Siegel. Threshold modeling of autonomic control of heart rate variability, Biomed. Eng. Society, San Diego, 1997.

G. Stanley and R. Siegel. Threshold modeling of respiratory sinus arrhythmia, American Association of Pharmaceutical Scientists Western Regional, San Francisco, 1996.

G. Stanley, D. Verotta, N. Craft, R. Siegel, and J. Schwartz. Aging and/or autonomic blockade attenuation of lung
volume to heart rate transfer functions, Exp. Biology, Atlanta, 1996.

Articles by Topic

Vision

N. A. Lesica, J. Z. Jin, C. Weng, C. I. Yeh, D. A. Butts, G. B. Stanley, and J. M. Alonso. The role of contrast adaptation in the transmission of natural visual stimuli, in preparation, 2006.

D. A. Butts, C. Weng, J. Z. Jin, C. I. Yeh, N. A. Lesica, J. M. Alonso, and G. B. Stanley. Temporal precision in the neural code and the time scales of natural visual stimuli, in preparation, 2006.